計算生物概論
Introduction to Computaional Biology
| 節 | 週五 |
|---|---|
5 13:20–14:10 | 計算生物概論 A103（光復） 2 節連堂 |
6 14:20–15:10 |
* 根據陽明交大上課時間表所列
This course introduces the principles and practices of computational biology. The objective is to develop basic skills and abilities of students to understand the concepts, formulate strategies, and conduct computational biology analysis.
Calculus; Chemistry; Physics; Biology 1
無備註
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Homework 30%, midterm 35 %, final 35%
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| 週次 | 主題 |
|---|---|
| 第 1 週 | Brief introduction of computational biology (Lin) 9/16 |
| 第 2 週 | Sequence Alignment: Pairwise Sequence Alignment (Lin) 10/7 |
| 第 3 週 | Sequence Alignment: BLOSUM matrix and PAM scoring matrix (Lin) 9/30 |
| 第 4 週 | Basic Local Alignment Search Tool (Lin) 10/7 |
| 第 5 週 | Multiple Sequence Alignment, profile, and motif (Lin) 10/14 |
| 第 6 週 | Big data analysis and clustering (Lin) 10/21 |
| 第 7 週 | Gene expression analysis and functional enrichment analysis (Lin) 10/28 |
| 第 8 週 | Network Biology and Medicine (Lin) 11/4 |
| 第 9 週 | Midterm exam 11/11 |
| 第 10 週 | 請參加2022陽明交通大學生物科技學院 工程生物科學研討會--後疫情的挑戰與機會 (地點: 陽明交通大學博愛校區賢齊館) 11/18 |
| 第 11 週 | Structure alignment (Chu) 11/25 |
| 第 12 週 | Structure alignment (Chu) 12/2 |
| 第 13 週 | Structure alignment (Chu) 12/9 |
| 第 14 週 | Molecular mechanics (Chu) 12/16 |
| 第 15 週 | Molecular mechanics (Chu) 12/23 |
| 第 16 週 | Molecular mechanics (Chu) 12/30 |
| 第 17 週 | Molecular mechanics (Chu) 1/6 |
| 第 18 週 | Final exam 1/13 |
1.Lecture notes and supplementary materials provided by the instructors. 2.Reading material: Understanding bioinformatics by Zvelebil and Baum 2008 Garland Science (可於華通訂購).
- 地點
- 教師未提供此項資料
- 時間
- 朱智瑋 2CD 賢齊館 417 林峻宇 2CD 賢齊館 413
- 聯絡方式
- 林峻宇 chunyulin@nycu.edu.tw 朱智瑋 jwchu@nctu.edu.tw